MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,754
rRNA: 21
tRNA: 78
tmRNA: 1
Total number of protein coding genes annotated/found:
4,625
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5033|JADGMH010000010.1
MBF0791279.1
Genome Viewer
NA
AA
3963/1321
160405-156443
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
SEQF5033|JADGMH010000010.1
MBF0791172.1
Genome Viewer
NA
AA
3912/1304
35674-39585
DNA translocase FtsK
SEQF5033|JADGMH010000024.1
MBF0792534.1
Genome Viewer
NA
AA
3903/1301
6939-10841
ATP-dependent RNA helicase HrpA
SEQF5033|JADGMH010000011.1
MBF0791380.1
Genome Viewer
NA
AA
3888/1296
117173-113286
phosphoribosylformylglycinamidine synthase
SEQF5033|JADGMH010000001.1
MBF0788729.1
Genome Viewer
NA
AA
3882/1294
381883-385764
enterobactin non-ribosomal peptide synthetase EntF
SEQF5033|JADGMH010000008.1
MBF0790932.1
Genome Viewer
NA
AA
3801/1267
194028-190228
AsmA2 domain-containing protein YhdP
SEQF5033|JADGMH010000002.1
MBF0788925.1
Genome Viewer
NA
AA
3789/1263
87406-91194
WGR and DUF4132 domain-containing protein
SEQF5033|JADGMH010000007.1
MBF0790620.1
Genome Viewer
NA
AA
3780/1260
120500-116721
autotransporter assembly complex protein TamB
SEQF5033|JADGMH010000002.1
MBF0789038.1
Genome Viewer
NA
AA
3759/1253
230865-227107
AIDA-I family autotransporter adhesin YfaL/EhaC
SEQF5033|JADGMH010000030.1
MBF0792761.1
Genome Viewer
NA
AA
3741/1247
19610-23350
nitrate reductase Z subunit alpha
SEQF5033|JADGMH010000009.1
MBF0791138.1
Genome Viewer
NA
AA
3684/1228
187767-184084
methionine synthase
SEQF5033|JADGMH010000028.1
MBF0792693.1
Genome Viewer
NA
AA
3660/1220
2339-5998
salmochelin/enterobactin export ABC transporter IroC
SEQF5033|JADGMH010000002.1
MBF0788926.1
Genome Viewer
NA
AA
3633/1211
91204-94836
DUF4132 domain-containing protein
SEQF5033|JADGMH010000002.1
MBF0789154.1
Genome Viewer
NA
AA
3594/1198
355618-359211
acid-sensing system histidine kinase EvgS
SEQF5033|JADGMH010000006.1
MBF0790315.1
Genome Viewer
NA
AA
3543/1181
37463-41005
exodeoxyribonuclease V subunit beta
SEQF5033|JADGMH010000004.1
MBF0790010.1
Genome Viewer
NA
AA
3525/1175
352661-349137
pyruvate:ferredoxin (flavodoxin) oxidoreductase
SEQF5033|JADGMH010000005.1
MBF0790034.1
Genome Viewer
NA
AA
3483/1161
18801-15319
DNA polymerase III subunit alpha
SEQF5033|JADGMH010000013.1
MBF0791559.1
Genome Viewer
NA
AA
3474/1158
21843-18370
cellulose biosynthesis protein BcsC
SEQF5033|JADGMH010000031.1
MBF0792781.1
Genome Viewer
NA
AA
3468/1156
15138-11671
type VI secretion system membrane subunit TssM
SEQF5033|JADGMH010000004.1
MBF0789731.1
Genome Viewer
NA
AA
3447/1149
81454-78008
transcription-repair coupling factor
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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